Behron
60aaea751f
More merge conflicts. Taking main changes then will integrate mine.
48 lines
2.2 KiB
Markdown
48 lines
2.2 KiB
Markdown
# Flybody Description (MJCF)
|
|
|
|
Requires MuJoCo 2.2.2 or later.
|
|
|
|
## Overview
|
|
|
|
flybody is an anatomically-detailed body model of the fruit fly [Drosophila melanogaster]. The fly model was developed in a collaborative effort by Google DeepMind and [HHMI Janelia Research Campus](https://www.janelia.org/). It is taken with permission from the [official flybody repository] ([commit SHA](https://github.com/TuragaLab/flybody/commit/736608121847c3c025fd02a629bdb016a3294f9a)). For the most up-to-date model and source of truth, the user is encouraged to refer to the [official flybody repository].
|
|
|
|
<p float="left">
|
|
<img src="flybody.png" width="400">
|
|
<img src="flybody_collision.png" width="400">
|
|
</p>
|
|
|
|
## MJCF derivation steps
|
|
|
|
* In the [`build_fruitfly` directory] of the [official flybody repository], you'll find the data and code to produce this model, with a step-by-step process detailed in the [`build_fruitfly` README].
|
|
* You can also find a detailed write up of the modeling process in the methods section of the [bioRxiv paper].
|
|
|
|
## License
|
|
|
|
This model is released under an [Apache-2.0 License](LICENSE).
|
|
|
|
## Citation
|
|
|
|
If you use this work in an academic context, please cite the following publication:
|
|
|
|
```bibtex
|
|
@article{
|
|
flybody,
|
|
title = {Whole-body simulation of realistic fruit fly locomotion with
|
|
deep reinforcement learning},
|
|
author = {Roman Vaxenburg and Igor Siwanowicz and Josh Merel and Alice A Robie and
|
|
Carmen Morrow and Guido Novati and Zinovia Stefanidi and Gwyneth M Card and
|
|
Michael B Reiser and Matthew M Botvinick and Kristin M Branson and
|
|
Yuval Tassa and Srinivas C Turaga},
|
|
journal = {bioRxiv},
|
|
doi = {https://doi.org/10.1101/2024.03.11.584515},
|
|
url = {https://www.biorxiv.org/content/10.1101/2024.03.11.584515},
|
|
year = {2024},
|
|
}
|
|
```
|
|
|
|
[official flybody repository]: https://github.com/TuragaLab/flybody
|
|
[Drosophila melanogaster]: https://en.wikipedia.org/wiki/Drosophila_melanogaster
|
|
[bioRxiv paper]: https://www.biorxiv.org/content/10.1101/2024.03.11.584515v1
|
|
[`build_fruitfly` directory]: https://github.com/TuragaLab/flybody/tree/main/flybody/fruitfly/build_fruitfly
|
|
[`build_fruitfly` README]: https://github.com/TuragaLab/flybody/blob/main/flybody/fruitfly/build_fruitfly/README.md
|